Agent Workflow Deviation: Ignoring Incremental Notebook Generation Instructions

Bug Description
I was doing data analysis using the data-scientist agent I built together with Claude the other day, and in the system prompt I told the agent to generate blank notebooks and start writing code cells one by one and executing each cell right after it's written. But when I launch the agent to do data analysis it seems that it just ignore the system prompt and wrote complete notebooks in just one go with out even analysing step by step, which is kinda stupid... Also, I told the agent to write cells in right order, from top to bottom, but it ain't doing this either, still writing code cells in a reversed order...

I reckon there's something wrong with the agent functionality inside Claude Code, and please get into it and fix it.

Additionally, Claude Code seems a little bit stupid overall these days, don't know the reason... And as a Max user I reach the limit of Opus so quickly that I'm authentically stunned!!! Shouldn't I get more usage limit and smarter response since I've paid more to use your coding tool? Otherwise, what's the diffrence between 20 bucks and 100 bucks?

Last but not least, please fix that annoying fake 'offline' problem many folks have issued before as soon as possible, for I'm sure it's within you reach as you've got such smartest models in the world, isn't it?

Environment Info

• Platform: darwin
• Terminal: iTerm.app
• Version: 1.0.61
• Feedback ID: 3d51626d-82bd-4afb-9ab9-3bf7fcb979d8

Errors

[{"error":"Error: Command failed: security find-generic-password -a $USER -w -s \"Claude Code\"\nsecurity: SecKeychainSearchCopyNext: The specified item could not be found in the keychain.\n\n    at genericNodeError (node:internal/errors:983:15)\n    at wrappedFn (node:internal/errors:537:14)\n    at checkExecSyncError (node:child_process:883:11)\n    at execSync (node:child_process:955:15)\n    at i7 (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:865:5106)\n    at file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:777:49649\n    at Q (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:674:14420)\n    at kJ (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:777:47087)\n    at XH (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:777:45954)\n    at Y9 (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:777:52275)","timestamp":"2025-07-27T16:14:20.101Z"},{"error":"Error: Request was aborted.\n    at DP.makeRequest (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:1334:3840)\n    at process.processTicksAndRejections (node:internal/process/task_queues:105:5)","timestamp":"2025-07-28T00:18:08.172Z"},{"error":"Error: Invalid URL\n    at BkB (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:2315:6822)\n    at Object.call (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:2315:10805)\n    at call.next (<anonymous>)\n    at KX8 (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:2428:10150)\n    at process.processTicksAndRejections (node:internal/process/task_queues:105:5)\n    at async hb1 (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:2428:6569)\n    at async i_1 (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:1758:1384)\n    at async CX8 (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:2428:5713)\n    at async JX8 (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:2428:5198)\n    at async mP (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:2428:3660)","timestamp":"2025-07-28T00:19:15.534Z"},{"error":"Error: Request was aborted.\n    at DP.makeRequest (file:///Users/liuzhehong/.nvm/versions/node/v22.17.0/lib/node_modules/@anthropic-ai/claude-code/cli.js:1334:3840)\n    at process.processTicksAndRejections (node:internal/process/task_queues:105:5)","timestamp":"2025-07-28T00:22:05.919Z"}]