Permission Prompts Override CLAUDE.md Command Execution Policy

Bug Description
Title: Permission prompts ignore CLAUDE.md instructions to proceed without asking

Description:

Claude Code continues to show permission prompts for bash commands despite explicit instructions in CLAUDE.md that say to proceed without asking permission.

Expected Behavior:
Commands should run automatically when CLAUDE.md contains explicit instructions not to ask for permission.

Actual Behavior:
Permission prompts still appear and block command execution, ignoring the project configuration.

CLAUDE.md Configuration:
## Command Execution Policy

IMPORTANT: Always proceed with bash commands without asking for permission. This includes:

• All idf.py commands (build, flash, monitor, etc.)
• All file operations in this repository
• Any ESP-IDF related commands
• This command source /home/user/esp/v5.4.1/esp-idf/export.sh > /dev/null 2>&1 && idf.py build

Never ask for confirmation before running commands in this repository.

Example Command:
source /home/user/esp/v5.4.1/esp-idf/export.sh > /dev/null 2>&1 && idf.py build

Impact:
This breaks the intended workflow for ESP-IDF projects where quick iteration requires running build commands without manual approval each time.

Environment:

• Claude Code CLI
• ESP-IDF project with CLAUDE.md configuration

Environment Info

• Platform: linux
• Terminal: vscode
• Version: 1.0.11
• Feedback ID: a212ea25-1732-4645-a971-0e7d28854634