[Bug] Write/Edit tools bypass IDE diff approval flow when auto-accept disabled

Bug Description
Issue: Write/Edit tools bypass IDE diff approval flow entirely

• Expected: File changes should show in IDE diff UI for user

approval/rejection/modification

• Actual: Files written directly to disk without any approval UI
• Configuration: Auto-accept edits was explicitly DISABLED in

settings

• Impact: User has no opportunity to review/modify changes before

they hit filesystem

• Tools used: Write (creating new files), Edit (modifying files)

Environment Info

• Platform: darwin
• Terminal: ssh-session
• Version: 2.0.25
• Feedback ID: 37ba0bf4-f1b8-4d17-b62c-dcebd5ffb58b

Errors

[{"error":"Error: Error calling tool 'update': Invalid response for update PROJ-1\n    at d05 (/$bunfs/root/claude:746:7608)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:04:04.195Z"},{"error":"TypeError: Z.filter is not a function. (In 'Z.filter((X)=>this.baseline.has(this.normalizeFileUri(X.uri)))', 'Z.filter' is undefined)\n    at getNewDiagnostics (/$bunfs/root/claude:746:22680)\n    at async h8X (/$bunfs/root/claude:1706:8600)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:04:04.210Z"},{"error":"TypeError: Z.filter is not a function. (In 'Z.filter((X)=>this.baseline.has(this.normalizeFileUri(X.uri)))', 'Z.filter' is undefined)\n    at getNewDiagnostics (/$bunfs/root/claude:746:22680)\n    at async h8X (/$bunfs/root/claude:1706:8600)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:04:09.401Z"},{"error":"TypeError: Z.filter is not a function. (In 'Z.filter((X)=>this.baseline.has(this.normalizeFileUri(X.uri)))', 'Z.filter' is undefined)\n    at getNewDiagnostics (/$bunfs/root/claude:746:22680)\n    at async h8X (/$bunfs/root/claude:1706:8600)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:04:09.426Z"},{"error":"Error: Error calling tool 'show': Invalid response for show PROJ-1\n    at d05 (/$bunfs/root/claude:746:7608)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:04:19.570Z"},{"error":"TypeError: Z.filter is not a function. (In 'Z.filter((X)=>this.baseline.has(this.normalizeFileUri(X.uri)))', 'Z.filter' is undefined)\n    at getNewDiagnostics (/$bunfs/root/claude:746:22680)\n    at async h8X (/$bunfs/root/claude:1706:8600)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:04:19.612Z"},{"error":"Error: Request was aborted.\n    at _createMessage (/$bunfs/root/claude:364:4506)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:04:38.728Z"},{"error":"TypeError: Z.filter is not a function. (In 'Z.filter((X)=>this.baseline.has(this.normalizeFileUri(X.uri)))', 'Z.filter' is undefined)\n    at getNewDiagnostics (/$bunfs/root/claude:746:22680)\n    at async h8X (/$bunfs/root/claude:1706:8600)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:06:02.138Z"},{"error":"TypeError: Z.filter is not a function. (In 'Z.filter((X)=>this.baseline.has(this.normalizeFileUri(X.uri)))', 'Z.filter' is undefined)\n    at getNewDiagnostics (/$bunfs/root/claude:746:22680)\n    at async h8X (/$bunfs/root/claude:1706:8600)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:06:28.286Z"},{"error":"TypeError: Z.filter is not a function. (In 'Z.filter((X)=>this.baseline.has(this.normalizeFileUri(X.uri)))', 'Z.filter' is undefined)\n    at getNewDiagnostics (/$bunfs/root/claude:746:22680)\n    at async h8X (/$bunfs/root/claude:1706:8600)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:07:54.465Z"},{"error":"TypeError: Z.filter is not a function. (In 'Z.filter((X)=>this.baseline.has(this.normalizeFileUri(X.uri)))', 'Z.filter' is undefined)\n    at getNewDiagnostics (/$bunfs/root/claude:746:22680)\n    at async h8X (/$bunfs/root/claude:1706:8600)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:08:03.937Z"},{"error":"Error: EISDIR: illegal operation on a directory, read\n    at readFileSync (unknown)\n    at ez5 (/$bunfs/root/claude:3571:979)\n    at call (/$bunfs/root/claude:1705:949)\n    at JeX (/$bunfs/root/claude:2547:57799)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:08:26.361Z"},{"error":"TypeError: Z.filter is not a function. (In 'Z.filter((X)=>this.baseline.has(this.normalizeFileUri(X.uri)))', 'Z.filter' is undefined)\n    at getNewDiagnostics (/$bunfs/root/claude:746:22680)\n    at async h8X (/$bunfs/root/claude:1706:8600)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:10:41.627Z"},{"error":"Error: Request was aborted.\n    at _createMessage (/$bunfs/root/claude:364:4506)\n    at processTicksAndRejections (native:7:39)","timestamp":"2025-10-24T06:10:45.429Z"},{"error":"TypeError: Z.filter is not a function. (In 'Z.filter((X)=>this.baseli

Note: Error logs were truncated.