[BUG] Agent Team Isolation per Git Worktree

Preflight Checklist

• [x] I have searched existing issues and this hasn't been reported yet
• [x] This is a single bug report (please file separate reports for different bugs)
• [x] I am using the latest version of Claude Code

What's Wrong?

When running multiple Claude Code terminals from different git worktrees, agent teams are stored globally at ~/.claude/teams/ and ~ ~/.claude/tasks/. This causes race conditions where one instance's team cleanup/delete operations affect teams created by another instance working in a different worktree.

What Should Happen?

Claude code should support creating the agent team files in the worktree to prevent race conditions

Error Messages/Logs

Steps to Reproduce

launch claude code in a worktree
launch agent teams in the worktree with active work

launch another claude code session in another worktree
start using agent teams and then stop and clean up the agent teams

This will wipe all files in ~/.claude/teams including the agents, tasks and inbox etc of all agents irrespective of the worktree they are working in. all agent teams are deleted breaking all worktree sessions

Claude Model

None

Is this a regression?

No, this never worked

Last Working Version

_No response_

Claude Code Version

2.1.34

Platform

Anthropic API

Operating System

Ubuntu/Debian Linux

Terminal/Shell

Xterm

Additional Information

_No response_